Title | Author | Cited by |
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The Immune Epitope Database (IEDB): 2018 update. Randi Vita , Swapnil Mahajan , James A Overton , Sandeep Kumar Dhanda , Sheridan Martini , Jason R Cantrell , Daniel K Wheeler , Alessandro Sette , Bjoern Peters - Nucleic Acids Research, 2019 | ![]() ![]() ![]() | 399 |
RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences. Stephen K Burley , Charmi Bhikadiya , Chunxiao Bi , Sebastian Bittrich , Li Chen , Gregg V Crichlow , Cole H Christie , Kenneth Dalenberg , Luigi Di Costanzo , Jose M Duarte , Shuchismita Dutta , Zukang Feng , Sai Ganesan , David S Goodsell , Sutapa Ghosh , Rachel Kramer Green , Vladimir Guranović , Dmytro Guzenko , Brian P Hudson , Catherine L Lawson , Yuhe Liang , Robert Lowe , Harry Namkoong , Ezra Peisach , Irina Persikova , Chris Randle , Alexander Rose , Yana Rose , Andrej Sali , Joan Segura , Monica Sekharan , Chenghua Shao , Yi-Ping Tao , Maria Voigt , John D Westbrook , Jasmine Y Young , Christine Zardecki , Marina Zhuravleva - Nucleic Acids Research, 2021 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | 645 |
Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures. Sehnal D , Burley Sk , Koča J , Berka K , Velankar S , Deshpande M , Rose As , Svobodová R , Bittrich S , Bazgier - Nucleic Acids Research, 2021 | ![]() ![]() ![]() ![]() | 0 |
The Human Phenotype Ontology in 2021. Sebastian Köhler , Michael Gargano , Nicolas Matentzoglu , Leigh C Carmody , David Lewis-Smith , Nicole A Vasilevsky , Daniel Danis , Ganna Balagura , Gareth Baynam , Amy M Brower , Tiffany J Callahan , Christopher G Chute , Johanna L Est , Peter D Galer , Shiva Ganesan , Matthias Griese , Matthias Haimel , Julia Pazmandi , Marc Hanauer , Nomi L Harris , Michael J Hartnett , Maximilian Hastreiter , Fabian Hauck , Yongqun He , Tim Jeske , Hugh Kearney , Gerhard Kindle , Christoph Klein , Katrin Knoflach , Roland Krause , David Lagorce , Julie A McMurry , Jillian A Miller , Monica C Munoz-Torres , Rebecca L Peters , Christina K Rapp , Ana M Rath , Shahmir A Rind , Avi Z Rosenberg , Michael M Segal , Markus G Seidel , Damian Smedley , Tomer Talmy , Yarlalu Thomas , Samuel A Wiafe , Julie Xian , Zafer Yüksel , Ingo Helbig , Christopher J Mungall , Melissa A Haendel , Peter N Robinson , None - Nucleic Acids Research, 2021 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | 5 |
GenBank Dennis A Benson , Mark Cavanaugh , Karen Clark , Ilene Karsch-Mizrachi , David J Lipman , James Ostell , Eric W Sayers - Nucleic Acids Research, 1992 | 508 | |
Human Disease Ontology 2018 update: classification, content and workflow expansion Lynn M Schriml , Elvira Mitraka , James Munro , Becky Tauber , Mike Schor , Lance Nickle , Victor Felix , Linda Jeng , Cynthia Bearer , Richard Lichenstein , Katharine Bisordi , Nicole Campion , Brooke Hyman , David Kurland , Connor Patrick Oates , Siobhan Kibbey , Poorna Sreekumar , Chris Le , Michelle Giglio , Carol Greene , Cynthia Bearer , Richard Lichenstein , Chris Le - Nucleic acids research, 2019 | ![]() ![]() | 463 |
Poly (ADP-ribosyl) ation by PARP1: reaction mechanism and regulatory proteins Elizaveta E Alemasova , Olga I Lavrik - Nucleic acids research, 2019 | 426 | |
ICEberg 2.0: an updated database of bacterial integrative and conjugative elements. Meng Liu , Xiaobin Li , Yingzhou Xie , Dexi Bi , Jingyong Sun , Jun Li , Cui Tai , Zixin Deng , Hong-Yu Ou - Nucleic Acids Research, 2019 | ![]() ![]() ![]() | 93 |
Genenames.org: the HGNC and VGNC resources in 2017 Bethan Yates , Bryony Braschi , Kristian A. Gray , Ruth L. Seal , Susan Tweedie , Elspeth A. Bruford - Nucleic Acids Research, 2017 | ![]() | 249 |
Whole genome experimental maps of DNA G-quadruplexes in multiple species. Giovanni Marsico , Vicki S Chambers , Aleksandr B Sahakyan , Patrick McCauley , Jonathan M Boutell , Marco Di Antonio , Shankar Balasubramanian - Nucleic Acids Research, 2019 | ![]() ![]() ![]() | 96 |
Genenames.org: the HGNC and VGNC resources in 2021. Susan Tweedie , Bryony Braschi , Kristian Gray , Tamsin E M Jones , Ruth L Seal , Bethan Yates , Elspeth A Bruford - Nucleic Acids Research, 2021 | ![]() ![]() | 4 |
Delicate structural coordination of the Severe Acute Respiratory Syndrome coronavirus Nsp13 upon ATP hydrolysis. Zhihui Jia , Liming Yan , Zhilin Ren , Lijie Wu , Jin Wang , Jing Guo , Litao Zheng , Zhenhua Ming , Lianqi Zhang , Zhiyong Lou , Zihe Rao - Nucleic Acids Research, 2019 | ![]() | 123 |
The International Genome Sample Resource (IGSR) collection of open human genomic variation resources. Susan Fairley , Ernesto Lowy-Gallego , Emily Perry , Paul Flicek - Nucleic Acids Research, 2020 | ![]() ![]() | 29 |
LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse Liang Cheng , Pingping Wang , Rui Tian , Song Wang , Qinghua Guo , Meng Luo , Wenyang Zhou , Guiyou Liu , Huijie Jiang , Qinghua Jiang - Nucleic Acids Research, 2019 | ![]() ![]() | 149 |
The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures. Antonina Andreeva , Eugene Kulesha , Julian Gough , Alexey G Murzin - Nucleic Acids Research, 2020 | ![]() ![]() | 38 |
TransmiR v2.0: an updated transcription factor-microRNA regulation database. Zhan Tong , Qinghua Cui , Juan Wang , Yuan Zhou - Nucleic Acids Research, 2019 | 82 | |
Transfer RNA demethylase ALKBH3 promotes cancer progression via induction of tRNA-derived small RNAs. Zhuojia Chen , Meijie Qi , Bin Shen , Guanzheng Luo , Yingmin Wu , Jiexin Li , Zhike Lu , Zhong Zheng , Qing Dai , Hongsheng Wang - Nucleic Acids Research, 2019 | ![]() ![]() ![]() ![]() | 53 |
RCSB Protein Data Bank (RCSB. org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning Stephen K Burley , Charmi Bhikadiya , Chunxiao Bi , Sebastian Bittrich , Henry Chao , Li Chen , Paul A Craig , Gregg V Crichlow , Kenneth Dalenberg , Jose M Duarte , Shuchismita Dutta , Maryam Fayazi , Zukang Feng , Justin W Flatt , Sai Ganesan , Sutapa Ghosh , David S Goodsell , Rachel Kramer Green , Vladimir Guranovic , Jeremy Henry , Brian P Hudson , Igor Khokhriakov , Catherine L Lawson , Yuhe Liang , Robert Lowe , Ezra Peisach , Irina Persikova , Dennis W Piehl , Yana Rose , Andrej Sali , Joan Segura , Monica Sekharan , Chenghua Shao , Brinda Vallat , Maria Voigt , Ben Webb , John D Westbrook , Shamara Whetstone , Jasmine Y Young , Arthur Zalevsky , Christine Zardecki - Nucleic acids research, 2023 | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | 222 |
15 years of PhosphoSitePlus{\textregistered}: integrating post-translationally modified sites, disease variants and isoforms Peter V Hornbeck , Jon M Kornhauser , Vaughan Latham , Beth Murray , Vidhisha Nandhikonda , Alex Nord , Elżbieta Skrzypek , Travis Wheeler , Bin Zhang , Florian Gnad - Nucleic acids research, 2019 | ![]() | 254 |
The transporter classification database (TCDB): 2021 update Milton H Saier Jr , Vamsee S Reddy , Gabriel Moreno-Hagelsieb , Kevin J Hendargo , Yichi Zhang , Vasu Iddamsetty , Katie Jing Kay Lam , Nuo Tian , Steven Russum , Jianing Wang , Arturo Medrano-Soto , Vamsee S Reddy , Yichi Zhang - Nucleic acids research, 2021 | ![]() ![]() | 265 |